PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK35096.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family WRKY
Protein Properties Length: 271aa    MW: 30264 Da    PI: 4.644
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK35096.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.72.7e-2968126259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ + itY  +Hnh+
  KFK35096.1  68 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTKLMITYACDHNHP 126
                 69*************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-3059128IPR003657WRKY domain
PROSITE profilePS5081131.50262128IPR003657WRKY domain
SuperFamilySSF1182903.92E-2563128IPR003657WRKY domain
SMARTSM007742.2E-3367127IPR003657WRKY domain
PfamPF031062.1E-2469126IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MHRRGQESDD EEDETYNDVV PESPSSCEDS KISKPTPKKR RNVEKRVVSV PIADVEGSKS  60
RGEVYPPSDS WAWRKYGQKP IKGSPYPRGY YRCSSSKGCP ARKQVERSRV DPTKLMITYA  120
CDHNHPFPSS SNSKSHHHRT SVVLKSAKKE QTYEEDDEEE EEEEPTTVAT VVEEEPAGLD  180
LSHVDSPLLL GGCYSEIGEF GWFYDASISS SSSGSDFLDV SFSVGEEDES LFGDLGDLPD  240
CASVFRRGTV ATEEQHRRCD FGAIPFCDSS R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A3e-1757129778Probable WRKY transcription factor 4
1wj2_A3e-1757129778Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF4211561e-146AF421156.1 Arabidopsis thaliana WRKY transcription factor 69 (WRKY69) mRNA, complete cds.
GenBankEU9124131e-146EU912413.1 Brassica napus WRKY69-1 transcription factor (WRKY69-1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_567073.21e-160WRKY DNA-binding protein 69
SwissprotQ93WV51e-162WRK69_ARATH; Probable WRKY transcription factor 69
TrEMBLA0A087GYZ40.0A0A087GYZ4_ARAAL; Uncharacterized protein
STRINGAT3G58710.11e-158(Arabidopsis thaliana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.21e-146WRKY DNA-binding protein 69